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1

Dragons in our midst: Phyloforensics of illegally traded Southeast Asian monitor lizards

Welton, Luke J., Siler, Cameron D., Linkem, Charles W., Diesmos, Arvin C., Diesmos, Mae L., Sy, Emerson, Brown, Rafe M.

Journal:

Biological Conservation

Year:

2013

Language:

english

File:

PDF, 1.23 MB

english, 2013

2

Evolutionary Processes of Diversification in a Model Island Archipelago

Brown, Rafe M., Siler, Cameron D., Oliveros, Carl H., Esselstyn, Jacob A., Diesmos, Arvin C., Hosner, Peter A., Linkem, Charles W., Barley, Anthony J., Oaks, Jamie R., Sanguila, Marites B., Welton, Lu

Journal:

Annual Review of Ecology Evolution and Systematics

Year:

2013

Language:

english

File:

PDF, 1.96 MB

english, 2013

3

Philippine Bent-Toed Geckos of the Cyrtodactylus agusanensis Complex: Multilocus Phylogeny, Morphological Diversity, and Descriptions of Three New Species

Welton, Luke J., Siler, Cameron D., Linkem, Charles W., Diesmos, Arvin C., Brown, Rafe M.

Journal:

Herpetological Monographs

Year:

2010

Language:

english

File:

PDF, 4.54 MB

english, 2010

4

Phylogenomics of Phrynosomatid Lizards: Conflicting Signals from Sequence Capture versus Restriction Site Associated DNA Sequencing

Leache, A. D., Chavez, A. S., Jones, L. N., Grummer, J. A., Gottscho, A. D., Linkem, C. W.

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 770 KB

english, 2015

5

Phylogenomics of a rapid radiation: is chromosomal evolution linked to increased diversification in north american spiny lizards (Genus Sceloporus)?

Leaché, Adam D., Banbury, Barbara L., Linkem, Charles W., de Oca, Adrián Nieto-Montes

Journal:

BMC Evolutionary Biology

Year:

2016

Language:

english

File:

PDF, 2.61 MB

english, 2016

6

Damselflies that prefer dark habitats illustrate the importance of light as an ecological resource

Henry, Elizabeth R, Rivera, Julio A, Linkem, Christina N, Scales, Jeffrey A, Butler, Marguerite A

Journal:

Biological Journal of the Linnean Society

Year:

2018

Language:

english

File:

PDF, 190 KB

english, 2018

7

AFS Roots: Mothers of Fishes

Murphy, Christina A., Zatkos, Lauren, Antonelli, Kelsi, CÃ¡rdenas, A. Brent, Linkem, Christina, Manning, Michael, Olivos, Juan Andres, Penaluna, Brooke E., Pollock, Amanda, Arismendi, Ivan

Journal:

Year:

2020

File:

PDF, 1.46 MB

2020

8

Species boundaries and cryptic lineage diversity in a Philippine forest skink complex (Reptilia; Squamata; Scincidae: Lygosominae)

Charles W. Linkem, Kyle Miller Hesed, Arvin C. Diesmos, Rafe M. Brown

Journal:

Molecular Phylogenetics and Evolution

Year:

2010

Language:

english

File:

PDF, 1.93 MB

english, 2010

9

Phylogeography and historical demography of Polypedates leucomystax in the islands of Indonesia and the Philippines: Evidence for recent human-mediated range expansion?

Rafe M. Brown, Charles W. Linkem, Cameron D. Siler, Jeet Sukumaran, Jacob A. Esselstyn, Arvin C. Diesmos, Djoko T. Iskandar, David Bickford, Ben J. Evans, Jimmy A. McGuire, Lee Grismer, Jatna Supriatn

Journal:

Molecular Phylogenetics and Evolution

Year:

2010

Language:

english

File:

PDF, 739 KB

english, 2010

10

MITOCHONDRIAL INTROGRESSION AND INCOMPLETE LINEAGE SORTING THROUGH SPACE AND TIME: PHYLOGENETICS OF CROTAPHYTID LIZARDS

Jimmy A. McGuire, Charles W. Linkem, Michelle S. Koo, Delbert W. Hutchison, A. Kristopher Lappin, David I. Orange, Julio Lemos-Espinal, Brett R. Riddle, Jef R. Jaeger

Journal:

Year:

2007

Language:

english

File:

PDF, 6.71 MB

english, 2007

11

Molecular systematics of the Philippine forest skinks (Squamata: Scincidae: Sphenomorphus): testing morphological hypotheses of interspecific relationships

CHARLES W. LINKEM, ARVIN C. DIESMOS, RAFE M. BROWN

Journal:

Zoological Journal of the Linnean Society

Year:

2011

Language:

english

File:

PDF, 869 KB

english, 2011

12

Did geckos ride the Palawan raft to the Philippines?

Cameron D. Siler, Jamie R. Oaks, Luke J. Welton, Charles W. Linkem, John C. Swab, Arvin C. Diesmos, Rafe M. Brown

Journal:

Journal of Biogeography

Year:

2012

Language:

english

File:

PDF, 2.16 MB

english, 2012

13

A New Species of Scincid Lizard (Genus Sphenomorphus) from Palawan Island, Philippines

Linkem, Charles W., Diesmos, Arvin C., Brown, Rafe M.

Journal:

Year:

2010

Language:

english

File:

PDF, 387 KB

english, 2010

14

Stochastic faunal exchanges drive diversification in widespread Wallacean and Pacific island lizards (Squamata: Scincidae: Lamprolepis smaragdina )

Linkem, Charles W., Brown, Rafe M., Siler, Cameron D., Evans, Ben J., Austin, Christopher C., Iskandar, Djoko T., Diesmos, Arvin C., Supriatna, Jatna, Andayani, Noviar, McGuire, Jimmy A., Ebach, Malte

Journal:

Journal of Biogeography

Year:

2013

Language:

english

File:

PDF, 1.33 MB

english, 2013

15

Comparative Species Divergence across Eight Triplets of Spiny Lizards (Sceloporus) Using Genomic Sequence Data

Leache, A. D., Harris, R. B., Maliska, M. E., Linkem, C. W.

Journal:

Genome Biology and Evolution

Year:

2013

Language:

english

File:

PDF, 577 KB

english, 2013

16

Mitochondrial Introgression and Incomplete Lineage Sorting through Space and Time: Phylogenetics of Crotaphytid Lizards

Jimmy A. McGuire, Charles W. Linkem, Michelle S. Koo, Delbert W. Hutchison, A. Kristopher Lappin, David I. Orange, Julio Lemos-Espinal, Brett R. Riddle and Jef R. Jaeger

Journal:

Year:

2007

Language:

english

File:

PDF, 3.71 MB

english, 2007

17

A hybrid phylogenetic–phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification

Leaché, Adam D., Wagner, Philipp, Linkem, Charles W., Böhme, Wolfgang, Papenfuss, Theodore J., Chong, Rebecca A., Lavin, Brian R., Bauer, Aaron M., Nielsen, Stuart V., Greenbaum, Eli, Rödel, Mark-Oliv

Journal:

Molecular Phylogenetics and Evolution

Year:

2014

Language:

english

File:

PDF, 2.79 MB

english, 2014

18

Implications of uniformly distributed, empirically informed priors for phylogeographical model selection: A reply to Hickerson et al.

Oaks, Jamie R., Linkem, Charles W., Sukumaran, Jeet

Journal:

Year:

2014

Language:

english

File:

PDF, 2.50 MB

english, 2014

19

A NEW SPECIES OF BENT-TOED GECKO CYRTODACTYLUS GRAY, 1827, (SQUAMATA: GEKKONIDAE) FROM THE ISLAND OF SULAWESI, INDONESIA

Hayden, Christopher J., Brown, Rafe M., Gillespie, Graeme, Iqbal Setiadi, M., Linkem, Charles W., Iskandar, Djoko T., Umilaela,, Bickford, David P., Riyanto, Awal, Mumpuni,, McGuire, Jimmy A.

Journal:

Year:

2008

Language:

english

File:

PDF, 1.16 MB

english, 2008

20

A New Species of Bent-Toe Gecko (Gekkonidae: Cyrtodactylus) from Sulawesi Island, Eastern Indonesia

Linkem, Charles W., McGuire, Jimmy A., Hayden, Christopher J., Setiadi, Mohammed Iqbal, Bickford, David P., Brown, Rafe M.

Journal:

Year:

2008

Language:

english

File:

PDF, 1.16 MB

english, 2008

21

EVIDENCE FOR CLIMATE-DRIVEN DIVERSIFICATION? A CAUTION FOR INTERPRETING ABC INFERENCES OF SIMULTANEOUS HISTORICAL EVENTS

Oaks, Jamie R., Sukumaran, Jeet, Esselstyn, Jacob A., Linkem, Charles W., Siler, Cameron D., Holder, Mark T., Brown, Rafe M.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.56 MB

english, 2013

22

Choice of Topology Estimators in Bayesian Phylogenetic Analysis

Sukumaran, J., Linkem, C. W.

Journal:

Molecular Biology and Evolution

Year:

2008

Language:

english

File:

PDF, 38 KB

english, 2008

23

Phylogenomics of Horned Lizards (Genus: Phrynosoma ) Using Targeted Sequence Capture Data

Leaché, Adam D., Linkem, Charles W.

Journal:

Year:

2015

Language:

english

File:

PDF, 269 KB

english, 2015

24

A New Species of Bent-Toed Gecko Cyrtodactylus Gray, 1827, (Squamata: Gekkonidae) from the Island of Sulawesi, Indonesia

Christopher J. Hayden, Rafe M. Brown, Graeme Gillespie, M. Iqbal Setiadi, Charles W. Linkem, Djoko T. Iskandar, Umilaela, David P. Bickford, Awal Riyanto, Mumpuni and Jimmy A. McGuire

Journal:

Year:

2008

Language:

english

File:

PDF, 2.28 MB

english, 2008

25

A NEW SPECIES OF SCINCID LIZARD (GENUS SPHENOMORPHUS ) FROM PALAWAN ISLAND, PHILIPPINES

Charles W. Linkem, Arvin C. Diesmos and Rafe M. Brown

Journal:

Year:

2010

Language:

english

File:

PDF, 1.70 MB

english, 2010

26

A NEW SPECIES OF PLATYMANTIS (AMPHIBIA: ANURA: RANIDAE) FROM PANAY ISLAND, PHILIPPINES

Siler, Cameron D., Linkem, Charles W., Diesmos, Arvin C., Alcala, Angel C.

Journal:

Year:

2007

Language:

english

File:

PDF, 1020 KB

english, 2007

27

Detecting the anomaly zone in species trees and evidence for a misleading signal in higher-level skink phylogeny (Squamata: Scincidae).

Linkem, Charles W., Minin, Vladimir N., Leaché, Adam D.

Journal:

Systematic Biology

Year:

2016

Language:

english

File:

PDF, 1.46 MB

english, 2016

28

A New Species of Platymantis: Amphibia: Anura: Ranidea) from Panay Island, Philippines

Cameron D. Siler, Charles W. Linkem, Arvin C. Diesmos and Angel C. Alcala

Journal:

Year:

2007

Language:

english

File:

PDF, 2.69 MB

english, 2007

29

The transfer of two clades of Malaysian Sphenomorphus Fitzinger (Squamata: Scincidae) into the genus Tytthoscincus Linkem, Diesmos, & Brown and the description of a new Malaysian swamp-dwelling species

GRISMER, L. LEE, MUIN, MOHD ABDUL, WOOD, PERRY L. JR., ANUAR, SHAHRUL, LINKEM, CHARLES W.

Journal:

Year:

2016

Language:

english

File:

PDF, 5.38 MB

english, 2016

30

The first riparian skink (Genus: Sphenomorphus Strauch, 1887) from Peninsular Malaysia and its relationship to other Indochinese and Sundaic species

SUMARLI, ALEXANDRA, GRISMER, L. LEE, WOOD, PERRY L., JR., AHMAD, AMIRRUDIN B., RIZAL, SYED, ISMAIL, LUKMAN H., IZAM, NUR AMALINA MOHD, AHMAD, NORHAYATI, LINKEM, CHARLES W.

Journal:

Year:

2016

Language:

english

File:

PDF, 7.09 MB

english, 2016

31

Waterlogging Effects on Growth and Yield Components in Late-Planted Soybean

Linkemer, Geoffrey, Board, James E., Musgrave, Mary E.

Journal:

Year:

1998

Language:

english

File:

PDF, 225 KB

english, 1998

32

Multilocus species delimitation in the Crotalus triseriatus species group (Serpentes: Viperidae: Crotalinae), with the description of two new species

BRYSON, ROBERT JR. W., LINKEM, CHARLES W., DORCAS, MICHAEL E., LATHROP, AMY, JONES, JASON M., ALVARADO-DÍAZ, JAVIER, GRÜNWALD, CHRISTOPH I., MURPHY, ROBERT W.

Journal:

Year:

2014

File:

PDF, 6.37 MB

2014

33

Taxonomic revision of the semi-aquatic skink Parvoscincus leucospilos (Reptilia: Squamata: Scincidae), with description of three new species

SILER, CAMERON D., LINKEM, CHARLES W., COBB, KERRY, WATTERS, JESSA L., CUMMINGS, SEAN T., DIESMOS, ARVIN C., BROWN, RAFE M.

Journal:

Year:

2014

Language:

english

File:

PDF, 4.93 MB

english, 2014

34

From smooth to rough, from water to air: the intertidal habitat of Northern clingfish (Gobiesox maeandricus)

Ditsche, Petra, Hicks, Madeline, Truong, Lisa, Linkem, Christina, Summers, Adam

Journal:

Naturwissenschaften (The Science of Nature)

Year:

2017

Language:

english

File:

PDF, 3.44 MB

english, 2017

35

A phylogenomic perspective on the biogeography of skinks in the Plestiodon brevirostris group inferred from target enrichment of ultraconserved elements

Bryson, Robert W., Linkem, Charles W., Pavón-Vázquez, Carlos J., Nieto-Montes de Oca, Adrián, Klicka, John, McCormack, John E.

Journal:

Journal of Biogeography

Year:

2017

Language:

english

File:

PDF, 1.35 MB

english, 2017

36

Systematic revision of the Parvoscincus decipiens (Boulenger, 1894) complex of Philippine forest skinks (Squamata: Scincidae: Lygosominae) with descriptions of seven new species

LINKEM, CHARLES W., BROWN, RAFE M.

Journal:

Year:

2013

Language:

english

File:

PDF, 5.78 MB

english, 2013

37

Should I stay or should I go? Perching damselfly use simple colour and size cues to trigger flight

Schröder, Roland, Linkem, Christina N., Rivera, Julio A., Butler, Marguerite A.

Journal:

Animal Behaviour

Year:

2018

Language:

english

File:

PDF, 1.61 MB

english, 2018

38

A new species of Gekko (Squamata: Gekkonidae) from central Luzon Island, Philippines

LINKEM, CHARLES W., SILER, CAMERON D., DIESMOS, ARVIN C., SY, EMERSON, BROWN, RAFE M.

Journal:

Year:

2010

File:

PDF, 905 KB

2010

39

AFS Roots: Emmeline Moore, All Things to All Fishes

Zatkos, Lauren, Murphy, Christina A., Pollock, Amanda, Penaluna, Brooke E., Olivos, J. Andres, Mowlds, Emilee, Moffitt, Christine, Manning, Michael, Linkem, Christina, Holst, Lisa, CÃ¡rdenas, A. Brent

Journal:

Year:

2020

File:

PDF, 2.63 MB

2020